diff --git a/startup/deployStartup.sh b/startup/deployStartup.sh
new file mode 100755
index 0000000000000000000000000000000000000000..efbb99c31a8f37eea064985d74438f0134c340d7
--- /dev/null
+++ b/startup/deployStartup.sh
@@ -0,0 +1,53 @@
+#!/bin/sh
+
+#Prepare siteApp configuration for IOC instance specific configuration
+siteApp=/iocs/sis8300llrf
+mkdir -p $siteApp/log/
+mkdir -p $siteApp/run/
+
+cp $EPICS_SRC/e3-sis8300llrf/startup/llrf_template.iocsh $siteApp/llrf.iocsh
+slots_fpga=$(ls /dev/sis8300-* | cut -f2 -d "-")
+if [ ${#slots_fpga} -lt 1 ] ; then 
+  echo "Could not find SIS8300 digitiser board."
+  echo "Board slot must be manually configured in $siteApp/llrf.cmd"
+  snippet="epicsEnvSet(\"LLRF_PREFIX\"     \"$LLRF_IOC_NAME\" ) \\\n \
+epicsEnvSet(\"LLRF_SLOT\"       \"<slot>\"    ) \\\n \
+iocshLoad $\(E3_CMD_TOP\)\/llrf.iocsh \\\n \
+iocshLoad $\(E3_CMD_TOP\)\/aliasing1.iocsh \\\n"
+  echo "snippet = $snippet"
+  eval "sed -e $'s/<snippet>/$snippet/g' < $EPICS_SRC/e3-sis8300llrf/startup/llrf_template.cmd  > $siteApp/llrf.cmd" 
+else
+  # Start board enumeration from 1.
+  i=1
+
+  snippet=""
+  for slot_fpga in $(ls /dev/sis8300-* | cut -f2 -d "-" | sort -n)
+  do
+    snippet="$snippet \\\n\
+epicsEnvSet(\"LLRF_PREFIX\"     \"$LLRF_IOC_NAME$i\" ) \\\n \
+epicsEnvSet(\"LLRF_SLOT\"       \"$slot_fpga\"    ) \\\n \
+iocshLoad $\(E3_CMD_TOP\)\/llrf.iocsh \\\n \
+iocshLoad $\(E3_CMD_TOP\)\/aliasing$i.iocsh \\\n"
+    i=$(($i+1))
+  done
+    #Populate digitiser slot and IOC Name in startup script.
+    eval "sed -e $'s/<snippet>/$snippet/g'\
+        < $EPICS_SRC/e3-sis8300llrf/startup/llrf_template.cmd  > $siteApp/llrf.cmd" 
+
+fi
+
+
+#Timing configuration
+# We check the EVR is available on PCIe to use in timing.iocsh snippet used to configure the EVR.
+pcie_enumeration=$(lspci | grep Xilinx | cut -c1-7)
+if [ ${#pcie_enumeration} != 7 ] ; then
+  echo "Could not find Timing Event Receiver on PCIexpress bus."
+  echo "Therefore no timing configuration created."
+  echo "# no timing configuration as no EVR detected on PCIe bus." > $siteApp/timing.iocsh 
+else
+  eval "sed -e 's/<B:D.F>/$pcie_enumeration/' -e 's/<LLRF_IOC_NAME>/$LLRF_IOC_NAME/' < $EPICS_SRC/e3-sis8300llrf/startup/timing_template.iocsh" > "/iocs/sis8300llrf/timing.iocsh"
+  cp $EPICS_SRC/e3-sis8300llrf/startup/tr-sequencer.sh $siteApp/tr-sequencer.sh
+fi
+
+# Alias template
+cp $EPICS_SRC/e3-sis8300llrf/startup/alias.template $siteApp/alias.template
diff --git a/startup/setPVs.sh b/startup/setPVs.sh
new file mode 100644
index 0000000000000000000000000000000000000000..b27dd27d4669b3248efe0da28284e9682a8821d0
--- /dev/null
+++ b/startup/setPVs.sh
@@ -0,0 +1,10 @@
+#!/bin/bash
+caput -s ${LLRF_IOC_NAME}:AI0-MAG.DESC "PreAmp Fwd"
+caput -s ${LLRF_IOC_NAME}:AI1-MAG.DESC "PwrAmp Fwd"
+caput -s ${LLRF_IOC_NAME}:AI2-SMON-MAGCURR.DESC "PwrAmp Rflct"
+caput -s ${LLRF_IOC_NAME}:AI3-SMON-MAGCURR.DESC "Circ Fwd"
+caput -s ${LLRF_IOC_NAME}:AI4-SMON-MAGCURR.DESC "Cav1 Fwd"
+caput -s ${LLRF_IOC_NAME}:AI5-SMON-MAGCURR.DESC "Cav1 Reflct"
+caput -s ${LLRF_IOC_NAME}:AI6-SMON-MAGCURR.DESC "Cav2 Fwd"
+caput -s ${LLRF_IOC_NAME}:AI7-SMON-MAGCURR.DESC "Cav2 Reflct"
+
diff --git a/testing/test1.sh b/testing/test1.sh
index f5ede7606e5a973de7e7e81cb7920b159315dfee..d4c87380dd200b8324e439e6d154a9c50fb9163a 100755
--- a/testing/test1.sh
+++ b/testing/test1.sh
@@ -82,7 +82,7 @@ echo 'Simulating backplane triggers to FPGA for pulse_coming, pulse_start and pu
 
 for i in `seq 1 50`
 do
-    echo "RF Pulse $i"
+    echo "Beam Pulse $i"
     sis8300drv_reg /dev/sis8300-$slot 0x404 -w 0x20
     sis8300drv_reg /dev/sis8300-$slot 0x404 -w 0x40
     sis8300drv_reg /dev/sis8300-$slot 0x404 -w 0x80